fhirpack.load.base module#

class fhirpack.load.base.BaseLoaderMixin[source]#

Bases: object

sendBytesToFile(input: list[bytearray] | None = None, paths: list[str] | None = None, guessExtension: bool = False, combine: bool = False, params: dict | None = None)[source]#

Saves the input to the specified paths.

Parameters:

  • input (Union[list[bytearray], None]) – Input to save. Defaults to None.

  • paths (Union[list[str], None]) – Paths to save the input to. Defaults to None.

  • guessExtension (Union[str, None]) – If True, the extension is guessed from the first 50 bytes of the input. Defaults to False.

  • combine (Union[str, None]) – If True, all input is combined into one file. Defaults to False.

  • params (Union[dict, None]) – Additional parameters. Defaults to None.

Raises:

  • NotImplementedError – If input is a DataFrame and ignoreFrame is False.

  • Exception – If the number of paths and the number of input blobs do not match.

Returns:

List of booleans indicating whether the operation was successful.

Return type:

list[bool]

sendDICOMToFiles(input: list[str] | list[fhirpy.lib.SyncFHIRReference] | list[fhirpy.lib.SyncFHIRResource] | None = None, combine: bool = False, params: dict | None = None, ignoreFrame: bool = False)[source]#

Saves the input in the dicom format to the specified paths.

Parameters:

  • input (Union[ list[str], list[SyncFHIRReference], list[SyncFHIRResource], None]) – Input to save. Defaults to None.

  • combine (Union[str, None]) – If True, all input is combined into one file. Defaults to False.

  • params (Union[dict, None]) – Additional parameters. Defaults to None.

  • ignoreFrame (Union[str, None]) – If True, the input is ignored if the object is a DataFrame. Defaults to False.

Raises:
sendResourcesToFiles(paths: list[str] | None = None, input: list[str] | list[fhirpy.lib.SyncFHIRReference] | list[fhirpy.lib.SyncFHIRResource] | None = None, combine: bool = False)[source]#

Serializes the input to JSON and saves it to the specified paths.

Parameters:

  • paths (Union[list[str], None]) – Paths to save the JSON files to. Defaults to None.

  • input (Union[list[str], list[SyncFHIRReference], list[SyncFHIRResource], None]) – Input to serialize. Defaults to None.

  • combine (Union[str, None]) – If True, all input is combined into one file. Defaults to False.

Raises:

  • NotImplementedError – If input is a DataFrame and ignoreFrame is False.

  • Exception – If the number of paths and the number of input blobs do not match.

Returns:

List of booleans indicating whether the operation was successful.

Return type:

list[bool]

sendToTable(input: list[str] | list[fhirpy.lib.SyncFHIRReference] | list[fhirpy.lib.SyncFHIRResource] | None = None, params: dict | None = None, ignoreFrame: bool = False, fileType: str = 'csv', paths: list[str] | None = None)[source]#

Saves the input in csv format to the specified paths.

Parameters:

  • input (Union[ list[str], list[SyncFHIRReference], list[SyncFHIRResource], None]) – Input to save. Defaults to None.

  • params (Union[dict, None]) – Additional parameters. Defaults to None.

  • ignoreFrame (Union[str, None]) – If True, the input is ignored if the object is a DataFrame. Defaults to False.

  • fileType (Union[str, None]) – The file type to save the input as. Defaults to “csv”.

  • paths (Union[list[str], None]) – Paths to save the input to. Defaults to None.

Raises: